Sounds like your analytics is “stuttering” a bit there (if i understand correctly). Possible to see your filter setup for appending the hostname to the URI?

just a few queries regarding subdomain filters:
i have setup filter for a site with
example.com
subdomain1.example.com
subdomain2.example.com

Have created a master profile and individual profile for each of the sub domains. have also applied an included filter and a sub domain filter (similar to yours) to each of the sub domains. In the reporting, i am getting errors with example.com/subdomain1.com shown the ‘visit this link’ and also overlay links.

if you can help out, that would be awesome

thanks heaps in advance

Technically if you add the setDomain variable into the script and make use of the filters it should not be an issue that you have 2 different UA profile tracking numbers. As this would then allow the subdomains and parent domain to use the same cookie information. Personally i’ve never tried this tracking sub-domains with different UA codes (you’ve given different profile numbers however, which should be fine), however you should be able to gather the data needed by using the same cookie and then applying the filters to the profiles.